The Fuhrman Group uses ‘omics data to better understand microbial growth, interactions, and biogeographies. Recent research has been focused on evaluating a promising new approach to simultaneously determine the growth rates of many different kinds of microbes from the within-genome distributions of DNA extracted from mixed populations. Fuhrman Lab postdoc Jesse McNichol elaborates on a pair of recent papers reporting their progress. Continue reading “In the Mix”
NEW CBIOMES PUBLICATION
Gregory L. Britten, Carlos M. Duarte, Boris Worm (2021), The recovery of global fish stocks remains uncertain, PNAS, doi: 10.1073/pnas.2108532118
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NEW CBIOMES PUBLICATION
Jacob Bien, Yan, X., Simpson, L., Christian L. Müller (2021), Tree-aggregated predictive modeling of microbiome data, Scientific Reports, doi: 10.1038/s41598-021-93645-3
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NEW CBIOMES PUBLICATION
Yong Zhang, Zhengke Li, Kai G. Schulz, Ying-Yu Hu, Andrew J. Irwin, Zoe V. Finkel (2021), Growth-dependent changes in elemental stoichiometry and macromolecular allocation in the coccolithophore Emiliania huxleyi under different environmental conditions, Limnology and Oceanography, doi: 10.1002/lno.11854
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NEW CBIOMES PUBLICATION
O. Carnicer, A.J. Irwin, Z.V. Finkel (2021), Traits influence dinoflagellate C:N:P, European J. Phycology, doi: 10.1080/09670262.2021.1914860
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NEW CBIOMES PUBLICATION
Christopher P. Kempes, Michael J. Follows, Hillary Smith, Heather Graham, Christopher H. House, Simon A. Levin (2021), Generalized Stoichiometry and Biogeochemistry for Astrobiological Applications, Bulletin of Mathematical Biology, doi: 10.1007/s11538-021-00877-5
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NEW CBIOMES PUBLICATION
Yi-Chun Yeh, Jesse C McNichol, David M Needham, Erin B Fichot, Jed A Fuhrman, Comprehensive single-PCR 16S and 18S rRNA community analysis validated with mock communities and denoising algorithms, Envir. Microbiol., doi: 10.1111/1462-2920.15553
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NEW CBIOMES PUBLICATION
Christopher L. Follett, Stephanie Dutkiewicz, Gael Forget, B.B. Cael, Michael J. Follows (2021), Moving ecological and biogeochemical transitions across the North Pacific, Limnology and Oceanography, doi: 10.1002/lno.11763
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NEW CBIOMES PUBLICATION
Gael Forget (2021), IndividualDisplacements.jl: a Julia package to simulate and study particle displacements within the climate system, The Journal of Open Source Software, doi: 10.21105/joss.02813
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NEW CBIOMES PUBLICATION
B.B. Cael, Bisson, K., Conte, M., Duret, M. T., Follett, C., Henson, S. A., et al. (2021), Open ocean particle flux variability from surface to seafloor, Geophysical Research Letters, doi: 10.1029/2021GL092895
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