Simons Collaboration on Computational Biogeochemical Modeling of Marine Ecosystems
Keisuke Inomura, Curtis Deutsch, Takako Masuda, Ondřej Prášil,
Michael J. Follows (2020), Quantitative models of nitrogen-fixing organisms, Computational and Structural Biotechnology Journal, doi: 10.1016/j.csbj.2020.11.022
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Emily J. Zakem, Martin F. Polz and Michael J. Follows (2020), Redox-informed models of global biogeochemical cycles, Nature Communications, doi: 10.1038/s41467-020-19454-w
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Postdoc John Casey continues to work closely with MIT-CBIOMES Group PI Mick Follows on research combining quantitative proteomics, flux balance analysis, and molecular modeling of membrane transports to develop a steady-state model of microbial acclimation to substrate limitation. A paper by the same name was recently published in PLOS Computational Biology. Continue reading “Towards a Better Model for the Microbe Membrane (Revisited)”
Emily Zakem, Jonathan Maitland Lauderdale, Reiner Schlitzer, Michael J. Follows (2020), A flux-based threshold for anaerobic activity in the ocean, ESSOar (for Geophysical Research Letters), doi: 10.1002/essoar.10504387.1
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John Casey and Michael J. Follows (2020), A steady-state model of microbial acclimation to substrate limitation, PLoS Computational Biology, doi: 10.1371/journal.pcbi.1008140
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A.W. Omta, D. Talmy, K. Inomura, A.J. Irwin, Z.V. Finkel, D. Sher, and M.J. Follows (2020), Quantifying nutrient throughput and DOM production by algae in continuous culture, Journal of Theoretical Biology, doi: 10.1016/j.
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Inomura, K. A-W. Omta, D. Talmy, J. Bragg, C. Deutsch, and M.J. Follows (2020), A Mechanistic Model of Macromolecular Allocation, Elemental Stoichiometry, and Growth Rate in Phytoplankton, Frontiers in Microbiology, doi: 10.3389/fmicb.2020.00086
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CBIOMES members please log in to access. Password issues contact cbiomesweb@gmail.com
CBIOMES members please log in to access. Password issues contact cbiomesweb@gmail.com