Simons Collaboration on Computational Biogeochemical Modeling of Marine Ecosystems
Christopher L. Follett, Stephanie Dutkiewicz, Gael Forget, B.B. Cael, Michael J. Follows (2021), Moving ecological and biogeochemical transitions across the North Pacific, Limnology and Oceanography, doi: 10.1002/lno.11763
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Keisuke Inomura, Curtis Deutsch, Takako Masuda, Ondřej Prášil,
Michael J. Follows (2020), Quantitative models of nitrogen-fixing organisms, Computational and Structural Biotechnology Journal, doi: 10.1016/j.csbj.2020.11.022
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Emily J. Zakem, Martin F. Polz and Michael J. Follows (2020), Redox-informed models of global biogeochemical cycles, Nature Communications, doi: 10.1038/s41467-020-19454-w
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Postdoc John Casey continues to work closely with MIT-CBIOMES Group PI Mick Follows on research combining quantitative proteomics, flux balance analysis, and molecular modeling of membrane transports to develop a steady-state model of microbial acclimation to substrate limitation. A paper by the same name was recently published in PLOS Computational Biology. Continue reading “Towards a Better Model for the Microbe Membrane (Revisited)”
Emily Zakem, Jonathan Maitland Lauderdale, Reiner Schlitzer, Michael J. Follows (2020), A flux-based threshold for anaerobic activity in the ocean, ESSOar (for Geophysical Research Letters), doi: 10.1002/essoar.10504387.1
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John Casey and Michael J. Follows (2020), A steady-state model of microbial acclimation to substrate limitation, PLoS Computational Biology, doi: 10.1371/journal.pcbi.1008140
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A.W. Omta, D. Talmy, K. Inomura, A.J. Irwin, Z.V. Finkel, D. Sher, and M.J. Follows (2020), Quantifying nutrient throughput and DOM production by algae in continuous culture, Journal of Theoretical Biology, doi: 10.1016/j.
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Inomura, K. A-W. Omta, D. Talmy, J. Bragg, C. Deutsch, and M.J. Follows (2020), A Mechanistic Model of Macromolecular Allocation, Elemental Stoichiometry, and Growth Rate in Phytoplankton, Frontiers in Microbiology, doi: 10.3389/fmicb.2020.00086
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CBIOMES members please log in to access. Password issues contact cbiomesweb@gmail.com