The 2022 CBIOMES Annual Meeting looked to the future and a welcome return to gathering in person. Continue reading “Looking Forward to being Together Again”
Looking Forward to being Together Again
CBIOMES Welcomes Erin Bertrand
A warm welcome to CBIOMES’ newest PI Dr. Erin Bertrand of Dalhousie University, Canada.
Continue reading “CBIOMES Welcomes Erin Bertrand”
NEW CBIOMES PUBLICATION
Zhen Wu, Jincheng Li, Yanxin Sun, Josep Peñuelas, Jilin Huang, Jordi Sardans, Qingsong Jiang, Jacques C. Finlay, Gregory L. Britten, Michael J. Follows, Wei Gao, Boqiang Qin, Jinren Ni, Shouliang Huo & Yong Liu (2022), Imbalance of global nutrient cycles exacerbated by the greater retention of phosphorus over nitrogen in lakes, Nature Geosciences, doi: 10.1038/s41561-022-00958-7
Get the PDF [Requires login]
NEW CBIOMES PUBLICATION
Tianqi Tang, Shengwei Hou, Jed A Fuhrman, Fengzhu Sun (2022), Phage–bacterial contig association prediction with a convolutional neural network, Bioinformatics, doi: 10.1093/bioinformatics/btac239
Get the PDF [Requires login]
NEW CBIOMES PUBLICATION
Kostadinov, T. S., Robertson Lain, L., Kong, C. E., Zhang, X., Maritorena, S., Bernard, S., Loisel, H., Jorge, D. S. F., Kochetkova, E., Roy, S., Jonsson, B., Martinez-Vicente, V., and Sathyendranath, S. (2022), Ocean Color Algorithm for the Retrieval of the Particle Size Distribution and Carbon-Based Phytoplankton Size Classes Using a Two-Component Coated-Spheres Backscattering Model, EGUsphere [preprint], doi: 10.5194/egusphere-2022-430
Get the PDF [Requires login]
NEW CBIOMES PUBLICATION
Robert J. W. Brewin, Giorgio Dall’Olmo, John Gittings, Xuerong Sun, Priscila K. Lange, Dionysios E. Raitsos, Heather A. Bouman, Ibrahim Hoteit, Jim Aiken, Shubha Sathyendranath (2022), A Conceptual Approach to Partitioning a Vertical Profile of Phytoplankton Biomass Into Contributions From Two Communities, JGR Oceans, doi: 10.1029/2021JC018195 [preprint]
Get the PDF [Requires login]
NEW CBIOMES PUBLICATION
Mohammad M. Amirian, Andrew J. Irwin, Zoe V. Finkel (2022), Extending the Monod Model of Microbial Growth with Memory, arXiv:2207:02028 [q-bio.PE]
Get the PDF [Requires login]
NEW CBIOMES PUBLICATION
Felix Milke, Selene Sanchez-Garcia, Leon Dlugosch, Jesse McNichol, Jed Fuhrman, Meinhard Simon, Irene Wagner-Döbler (2022), Composition and Biogeography of Planktonic Pro- and Eukaryotic Communities in the Atlantic Ocean: Primer Choice Matters, Frontiers in Microbiology, doi: 10.3389/fmicb.2022.895875
Get the PDF [Requires login]
Interpreting microbial growth rates from size distributions.
A multi-lab collaboration that grew out of the January 2020 Bayesian Workshop finds using the Bayesian approach can yield more realistic biological models and better constrained cellular growth rates. Continue reading “Interpreting microbial growth rates from size distributions.”
A Super-Speedy New Phytoplankton Model
CBIOMES researchers Zhen Wu and Gael Forget apply Julia to create a GPU-supported individual-based phytoplankton life cycle model.
Continue reading “A Super-Speedy New Phytoplankton Model”